• Baskaran, M., Hong, G.-H., and Santschi, P.H. 2009. Radionuclide analysis in seawater. In: "Practical Guidelines for the Analysis of Seawater", O. Wurl, editor, CRC Press, Taylor and Francis Group, in press
  • Crump, B.C., Peterson B.J., Raymond, P.A., Amon, R.M.W., Rinehart, A., McClelland, J.W., and Holmes, R.M., Circumpolar Synchrony in Big River Bacterioplankton, (2009 in press). Proceedings of the National Academy of Science, USA.
  • Ding, Y.-X., Hung, C.-C., Santschi, P.H., Verdugo, P., and Chin, W.-C. 2009. Spontaneous assembly of exopolymers from phytoplankton. Terrestrial, Atmospheric and Oceanic Sciences (TAO), accepted.
  • Louchouarn P., R.M.W. Amon, S. Duan, C. Pondell, S.M. Seward, and N. White (2009 – In Review). Analysis of lignin-derived phenols in standard reference materials and dissolved organic matter by gas chromatography/tandem mass spectrometry. Marine Chemistry.
  • Louchouarn, P., L-J. Kuo, T.L. Wade, and M. Schantz. (2009 - In Press). Determination of levoglucosan and its isomers in size fractions of aerosol standard reference materials. Atmospheric Environment. Vol. 43
  • Walker, S.A., R.M.W. Amon, C. Stedmon, S. Duan, P. Louchouarn. (2009 - In Press). The use of PARAFAC modeling to trace river water in the Canadian Archipelago. JGR-Biogeosciences.
  • Schloesser, R.W., J.R. Rooker, P. Louchouarn, J.D. Neilson, and D.H. Secor. (2009). Inter-decadal variation in ambient oceanic d13C and d18O recorded in fish otoliths. Limnology & Oceanography. Vol. 54(5), 1665–1668.
  • Wells RDJ, Harper JO, Rooker JR, Landry AM, Dellapenna TM (2009) Fish assemblage structure on a drowned barrier island in the northwestern Gulf of Mexico. Hydrobiologia 625:207–221.
  • Xu, C., Santschi, P.H., and Schwehr, K.A. Optimized isolation and purification procedure for obtaining strongly actinide binding exopolymeric substances (EPS) from two bacteria (Sagittula stellata and Pseudomonas fluorescens Biovar II), Bioresource Technology, accepted.
  • Zhang, S., and Santschi, P.H. 2009. Application of cross-flow ultrafiltration for isolating exopolymeric substances (EPS) from a marine diatom (Amphora sp.), Limnol. Oceanogr. Methods, conditionally accepted.


  • Brandenberger, J., E. Crecelius, and P. Louchouarn. (2008). Historical inputs and natural recovery rates of heavy metals and organic biomarkers in Puget Sound during the 20th century. Environmental Science & Technology. Vol. 42, 6786–6790.
  • Ding, Y.-X., Chin, W.-C., Rodriguez, A., Hung, C.-C., Santschi, P.H., and Verdugo, P. 2008. Amphiphilic exopolymers from Sagitulla stellata induce self-assembly of DOM polymers and the formation of marine microgels. Marine Chemistry, 112, 11–19.
  • Glass LA, Rooker JR, Kraus RT, Holt GJ (2008). Distribution, condition, and growth of newly settled southern flounder (Paralichthys lethostigma) in the Galveston Bay Estuary, Texas. Journal of Sea Research 59: 259-268
  • Hung, C., Moran, S.B., Cochran, J.K., Guo, L.D., and Santschi, P.H. 2008. Comment on “How accurate are 234Th measurements in seawater based on the MnO2-impregnated cartridge technique?” by Pinghe Cai et al., Geochem. Geophys. Geosyst., 9(2), Q02009, doi:10.1029/2007GC001770.
  • Kuo, L-J, B.E. Herbert, and P. Louchouarn. (2008). Can levoglucosan be used to characterize and quantify char/charcoal black carbon in environmental media? Organic Geochemistry. Vol. 39, 1466-1478.
  • Kuo, L-J, P. Louchouarn, and B.E. Herbert. (2008). Fate of CuO-derived lignin oxidation products during plant combustion: Application to the evaluation of char inputs to soil organic matter. Organic Geochemistry. Vol. 39, 1522–1536.
  • McClelland J.W., Holmes R.M., Peterson B. J., Amon R.M.W., Brabets T. Cooper L., Gibson J., Gordeev V.V., Guay C., Milburn D.. Staples R. Raymond P. A., Shiklomanov I., Striegl R. Zhulidov A., Gurtovaya T., Zimov S., 2008. Development of a Pan-Arctic Database for river chemistry. EOS, 8(24), 1-2.
  • Navarro, E., Miao, A.J., Baun, A., Behra, R., Bloch Hartmann, N.I., Filser, J., Quigg, A., Santschi, P.H., Sigg, L. 2008. Ecotoxicity of nanomaterials on photosynthetic organisms and fungi: state of the art and future needs. Ecotoxicology, 17, 372–386.
  • Quigg, A. 2008 Ecological Stoichiometry: Trace Elements. In Encyclopedia of Ecology. Elsevier. Invited Chapter, In press for release July 2008.
  • Quigg, A., Kevekordes, K. and Phillips, J. A. 2008 Ecophysiological status of 10 species of macroalgae and seagrasses examined in Moreton Bay (Queensland, Australia). In press Memoirs of the Queensland Museum.
  • Ravens, T.M., Thomas, R.C., Roberts, K.A., and Santschi, P.H. 2008. Causes of salt marsh erosion in Galveston Bay, Texas, Journal of Coastal Research, doi: 10.2112/07-0942.
  • Roberts, K.A., Santschi, P.H., and Honeyman, B.D. 2008. Pu(V) reduction and enhancement of particle-water partitioning by exopolymeric substances. Radiochim. Acta, 96(9-11), 739-745.
  • Rooker JR, Secor DH, DeMetrio G, Schloesser R, Block BA, Neilson JD (2008) Natal homing and connectivity in Atlantic bluefin tuna populations. Science 322: 742-744.
  • Rooker JR, Secor DH, DeMetrio G, Kaufman, JA, Belmonte Rios A, Ticina A (2008) Evidence of trans-Atlantic mixing and natal homing of bluefin tuna. Marine Ecology Progress Series 368: 231-239
  • Santschi, P.H., and Rowe, G.T. 2008. Radiocarbon-derived sedimentation rates in the Gulf of Mexico. Deep-Sea Res. II, Gulf of Mexico Special Issue, 55, 2572–2576.
  • Warnken, K.W., Santschi, P.H. 2008. Sediment and trace metal delivery from the Trinity River watershed to Galveston Bay and the Gulf of Mexico. Estuaries and Coasts, DOI 10.1007/s12237-008-9088-x.
  • Warnken, K.W., Santschi, P.H., Roberts, K.A., and Gill, G.A. 2008. The cycling and oxidation pathways of organic carbon in a shallow estuary along the Texas Gulf Coast. Estuarine, Coastal and Shelf Science, 76, 69-84.
  • Wen, L.-S., Warnken, K.W., and Santschi, P.H. 2008. The role of organic carbon, iron, and aluminium oxyhydroxides as trace metal carriers in the Trinity River and Trinity River Estuary (Galveston Bay, Texas), Marine Chemistry, 112, 20–37
  • Xu, C., Santschi, P.H., Zhong, J.Y., Hatcher, P.G., Francis, A.J., Dodge, C.J., Roberts, K.A., Hung, C.-C., Honeyman, B.D. 2008. Colloidal cutin-like substances cross-linked to siderophore decomposition products mobilizing plutonium from contaminated soils, Environmental Science and Technology, 42(22), 8211-8217.
  • Zhang, S., Xu, C., and Santschi, P.H. 2008. Chemical characterization of extracellular polymeric substances produced by the marine diatom Amphora sp., and their and interactions with 234Th (IV). Marine Chemistry, 112, 81-92.


  • Armitage, A.R., S.M. Jensen, J.E. Yoon, and R.F. Ambrose. 2007. Wintering shorebird assemblages and behavior in restored tidal wetlands in southern California. Restoration Ecology 15: 139-148
  • Berman-Frank, I., Quigg, A., Finkel, Z. V., Haramaty, L. and Irwin, A.J. 2007 Cyanobacterial strategy of nitrogen-fixation influences diazotroph dependence on iron resources. In press Limnology and Oceanography, 52 (5)
  • Doucet, F.J., Lead, J.R., and Santschi, P.H. 2007. Colloid-Trace Element Interactions in Aquatic Systems. In "Environmental Colloids and Particles: Behaviour, Separation and Characterisation," Wilkinson, K. and Lead, J. (Eds), Chapter 3, International Union of Pure and Applied Chemistry (IUPAC) Series on Analytical and Physical Chemistry of Environmental Systems, John Wiley, pp. 95-158.
  • Finkel, Z. V., Quigg, A., Chiampi, R., Schofield, O. and Falkowski, P. G. 2007 Phylogenetic diversity in Cd:P regulation by marine phytoplankton. Limnology and Oceanography, 52: 1131-1138.
  • Guo, L. and Santschi, P.H. 2007. Ultrafiltration and its applications to sampling and characterization of aquatic colloids. In "Environmental Colloids and Particles: Behaviour, Separation and Characterisation," Wilkinson, K. and Lead, J. (Eds), Chapter 4, International Union of Pure and Applied Chemistry (IUPAC) Series on Analytical and Physical Chemistry of Environmental Systems, John Wiley, pp.159-221.
  • Guo, L.D., Warnken, K.W., and Santschi, P.H. 2007. Retention behavior of dissolved uranium during ultrafiltration: Implications for colloidal uranium in surface waters. Mar. Chem., 107, 156-166.
  • Hammes, K., M.W.I. Schmidt, L.A. Currie, W.P. Ball, T.H. Nguyen, P. Louchouarn, and co-authors. (2007). Comparison of black carbon quantification methods using reference materials from soil, water, sediment and the atmosphere, and implications for the global carbon cycle. Global Biogeochemical Cycles. doi:10.1029/2006GB002914.
  • Hung, C.-C., Gong, G.-C., Chen, H.-Y., Hsieh, H.-L., Santschi, P.H., Wade, T.L., Sericano, J.L. 2007. Relationship between pesticides and organic carbon fractions in sediments of the Danshui River estuary and adjacent coastal areas of Taiwan. Environ. Pollution, 148, 546-554.
  • Louchouarn P., S. Chillrud, S. Houel, B. Yan, D. Chaky, C. Rumpel, C. Largeau, G. Bardoux, D. Walsh, and R.F. Bopp (2007). Elemental and isotopic evidence of soot- and char-derived black carbon inputs to New York City’s atmosphere during the 20th Century. Environmental Science & Technology. Vol. 41, 82-87
  • Santschi, P.H., Oktay, S.D., and Cifuentes, L., 2007. Carbon isotopes and iodine concentrations in a Mississippi River delta core recording land use, sediment transport, and dam building in the river's drainage basin. Mar. Env. Res., 63, 278-290.
  • Schulze, A., Cutler, E. B. & Giribet, G. 2007. Phylogeny of sipunculan worms: a combined analysis of four gene regions and morphology. Molecular Phylogenetics and Evolution, 42: 171-19.
  • Sylvan, J. B., Quigg, A., Tozzi, S. and Ammerman, J.W. 2007 Eutrophication induced phosphorus limitation in the Mississippi River Plume: Evidence from fast repetition rate fluorometry. In press Limnology and Oceanography.
  • Yeager, K.M., Santschi, P.H., Rifai, H.S., Suarez, M.P., Brinkmeyer, R.L., Hung, C.-C., Schindler, K., Andres, M., and Weaver, E. 2007. Dioxin chronology and fluxes in sediments of the Houston Ship Channel, Texas: Influence of non-steady state sediment transport and total organic carbon. Environ. Sci. Technol., 41, 5291-5298.


  • Anis, A., 2006. Similarity Relationships in the Unstable Aquatic Surface Layer. Geophys. Res. Lett., 33, L19609, doi:10.1029/2006GL027268.
  • Anis, A., and G. Singhal, 2006. Mixing in the Surface Boundary Layer of a Tropical Freshwater Reservoir. Journal of Marine Systems, 63, 225-243.
  • Armitage, A.R. and P. Fong. 2006. Predation and physical disturbance by crabs reduce the relative impacts of nutrients in a tidal mudflat. Marine Ecology Progress Series 313: 205-213.
  • Armitage, A.R. and J.W. Fourqurean. 2006. The short-term influence of herbivory near patch reefs varies between seagrass species. Journal of Experimental Marine Biology and Ecology 339: 65-74.
  • Gil, M., A.R. Armitage, and J.W. Fourqurean. 2006. Nutrients increase epifaunal abundance and shift species composition in subtropical seagrass beds. Hydrobiologia 569: 437-447
  • Finkel, Z. V., Quigg, A., Raven, J. A., Reinfelder, J., Schofield, O. E. and Falkowski, P. G. 2006 Irradiance-induced changes in the elemental stoichiometry of marine phytoplankton. Limnology and Oceanography, 51: 2690-2701.
  • Houel S., P. Louchouarn, M. Lucotte, R. Canuel and B. Ghaleb. (2006). Translocation of soil organic matter following reservoir impoundment in boreal systems: Implications for in-situ productivity. Limnology & Oceanography. Vol. 51(3), 1497–1513.
  • Quigg, A., Kevekordes, K., Raven, J. A. and Beardall, J. 2006 Limitations on microalgal growth at very low photon flux densities: the role of energy slippage and H+ leakage. Photosynthesis Research, 88: 299-310.
  • Schulze, A. 2006. Phylogeny and genetic diversity of palolo worms (Palola, Eunicidae) from the tropical north Pacific and the Caribbean. Biological Bulletin, 210: 25-37.
  • Vernieres, G., A. Anis, R. N. Miller, and L. L. Ehret, 2006: Generalized Inversion of Thermistor-Chain Data and a Layer Model of Lake Kinneret. Ocean Modeling, 12, 112-139


  • Armitage, A.R., T.A. Frankovich, K.L. Heck, Jr., and J.W. Fourqurean. 2005. Experimental nutrient enrichment causes complex changes in seagrass, microalgae, and macroalgae community structure in Florida Bay. Estuaries 28: 422-434
  • Benner, R., P. Louchouarn, and R. Amon. (2005). Terrigenous DOM in the Arctic Ocean and its transport to shallow and deep waters of the North Atlantic. Global Biogeochemical Cycles. Vol. 19.
  • Ishikawa, T., A. Barnston, K.A. Kastens, P. Louchouarn, and C. Ropelewski. (2005). Testing the efficacy of climate forecast maps as a means of communicating with policy makers. Cartography & Geographic Information Science. Vol. 32(1), 3-16.
  • Schulze, A., Cutler, E. B. and Giribet, G. 2005. Reconstructing the phylogeny of the Sipuncula. Hydrobiologia, 535/536: 277-296


  • Amon, R.M.W. and Meon, B., 2004. The biogeochemistry of dissolved organic matter and nutrients in two large Arctic estuaries and potential implications for our understanding of the Arctic Ocean system. Mar. Chem., 92: 311-330.
  • Armitage, A.R. and P. Fong. 2004. Upward cascading effects of nutrients: shifts in a benthic microalgal community and a negative herbivore response. Oecologia 139: 560-567
  • Benner, R., Benitez-Nelson, B., Kaiser, K., Amon R.M.W., 2004. Export of young terrigenous dissolved organic carbon from rivers to the Arctic Ocean. Geophys. Res. Lett., 31, L05305.
  • Boyer, K.E., P. Fong, A.R. Armitage, and R.A. Cohen. 2004. Elevated nutrient content of tropical macroalgae increases rates of herbivory in coral, seagrass, and mangrove habitats. Coral Reefs 23:530-538
  • Brandenberger J., P. Louchouarn, B.E. Herbert, and P. Tissot. (2004). Geochemical and hydrodynamic controls on arsenic and other trace metal cycling in a seasonally stratified US sub-tropical reservoir. Applied Geochemistry. Vol. 19, 1601-1623.
  • Meon, B. and Amon, R.M.W., 2004. Heterotrophic bacterial activity and fluxes of dissolved free amino acids (DFAA) and glucose in the Arctic Rivers Ob, Yenisei and the adjacent Kara Sea. Aquat. Microb. Ecol., 37: 121-135.
  • Schulze, A. and Rice, M. E. 2004. Sipunculan diversity at Twin Cays, Belize with a key to the species. Atoll Research Bulletin, 521:1-9


  • Amon, R.M.W, G. Budeus & B. Meon. 2003. Dissolved organic carbon (DOC) distribution and origin in the Nordic Seas: Exchanges with the Arctic Ocean and the North Atlantic. J. Geophys. Res.-Oceans: 108, No. C7 3221 10 1029/2002JC001594.
  • Gal, G., J. Imberger, T. Zohary, J. Antanucci, A. Anis, and T. Rosenberg (2003). Simulating the thermal dynamics of Lake Kinneret. Ecol. Modelling, 162, 69-86
  • Schulze, A. and Halanych, K. 2003. Siboglinid evolution shaped by habitat preference and sulfide tolerance. Hydrobiologia, 496: 199-205.
  • Schulze, A. 2003. Phylogeny of Vestimentifera (Siboglinidae, Annelida) inferred from morphology. Zoologica Scripta, 32: 321-342.